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start [2011/05/07 00:20]
brad Added Science DMZ link
start [2012/10/10 23:35] (current)
webmaster old revision restored (2011/09/30 13:11)
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 +Click the link to see some [[sample-ps-sites|sample sites]] and their perfsonar ping latency graphs.\\
 +If [[http://oss.oetiker.ch/smokeping/|Smokeping]] needs to be installed and configured, [[http://www.howtoforge.com/monitoring_network_latency_smokeping_debian_etch|this guide]] is what was used to install it on Balrog.\\ It is for an older version of Debian, but it still works for the newest version (Squeeze).
 +
 This site documents the work evaluating technologies for transferring genomes to the CBSE-managed TCGA archive site. This site documents the work evaluating technologies for transferring genomes to the CBSE-managed TCGA archive site.
 +
 +For current status see:
 +{{:genomepaper-6-22-11.pdf|LATEST REPORT}}
 +{{:genomereport-6-22.tar.gz|LATEST REPORT FILES}}
 +{{:paper.pdf|REPORT-1st-draft}}.
 +
 +Recent presentation on this project, made for CE-280N  {{:ce-280n_presentation.ppt|LATEST PRESENTATION}}.
  
 The plan for this evaluation site is as follows: The plan for this evaluation site is as follows:
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 Related research: Related research:
 +  - [[http://bioftp.org/index.php/Korean_Reference_Genome_data| KOREF Human Genome]]
   - [[http://portal.acm.org/citation.cfm?id=1592576|VL2: A Scalable and Flexible Data Center Network]] : [[VL2Notes|Notes]]   - [[http://portal.acm.org/citation.cfm?id=1592576|VL2: A Scalable and Flexible Data Center Network]] : [[VL2Notes|Notes]]
   - [[http://portal.acm.org/citation.cfm?id=956993.957002&coll=DL&dl=ACM&CFID=16657217&CFTOKEN=91943640|Web100: Extended TCP Instrumentation]]: [[Web100|Notes]]   - [[http://portal.acm.org/citation.cfm?id=956993.957002&coll=DL&dl=ACM&CFID=16657217&CFTOKEN=91943640|Web100: Extended TCP Instrumentation]]: [[Web100|Notes]]
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   * [[http://www4.ncsu.edu/~rhee/export/bitcp/cubic-paper.pdf|TCP Cubic Variant]]: [[Cubic|Notes]]   * [[http://www4.ncsu.edu/~rhee/export/bitcp/cubic-paper.pdf|TCP Cubic Variant]]: [[Cubic|Notes]]
   * [[ftp://ftp.cs.arizona.edu/xkernel/Papers/vegas.ps|TCP Vegas]] : [[Vegas|Notes]]    * [[ftp://ftp.cs.arizona.edu/xkernel/Papers/vegas.ps|TCP Vegas]] : [[Vegas|Notes]] 
 +  * [[http://gridftp.bio-mirror.net/biomirror/|Bio Mirror (uses GridFTP + UDT)]]
 +  * [[http://www.ogf.org/OGF22/materials/1144/gridftp-ogf22.ppt|Open Grid Forum - Presentation on GridFTP]]
 +  * GridFTP:
 +    * [[http://citeseerx.ist.psu.edu/viewdoc/download?doi=10.1.1.97.8734&rep=rep1&type=pdf| The Globus Striped GridFTP Framework and Server]]
 +    * [[http://citeseerx.ist.psu.edu/viewdoc/download?doi=10.1.1.109.1941&rep=rep1&type=pdf|Globus GridFTP: What’s New in 2007]]
 +    * [[http://citeseerx.ist.psu.edu/viewdoc/download?doi=10.1.1.138.6285&rep=rep1&type=pdf|The Globus eXtensible Input/Output System (XIO)]]
 +    * [[http://citeseerx.ist.psu.edu/viewdoc/download?doi=10.1.1.58.4783&rep=rep1&type=pdf| Internet Congestion Control for Future High Bandwidth-Delay Product Environments]]
 +  * UDT:
 +    * [[http://citeseerx.ist.psu.edu/viewdoc/download?doi=10.1.1.113.5963&rep=rep1&type=pdf| UDT: UDP-based Data Transfer for High-Speed Wide Area Networks ]]
 Other links: Other links:
   * [[http://www.dokuwiki.org/syntax|Wiki Syntax]]   * [[http://www.dokuwiki.org/syntax|Wiki Syntax]]
start.1304727601.txt.gz · Last modified: 2011/05/07 00:20 by brad