====== Differences ====== This shows you the differences between two versions of the page.
start [2011/04/26 00:18] mani |
start [2012/10/10 23:35] (current) webmaster old revision restored (2011/09/30 13:11) |
||
---|---|---|---|
Line 1: | Line 1: | ||
+ | Click the link to see some [[sample-ps-sites|sample sites]] and their perfsonar ping latency graphs.\\ | ||
+ | If [[http://oss.oetiker.ch/smokeping/|Smokeping]] needs to be installed and configured, [[http://www.howtoforge.com/monitoring_network_latency_smokeping_debian_etch|this guide]] is what was used to install it on Balrog.\\ It is for an older version of Debian, but it still works for the newest version (Squeeze). | ||
+ | |||
This site documents the work evaluating technologies for transferring genomes to the CBSE-managed TCGA archive site. | This site documents the work evaluating technologies for transferring genomes to the CBSE-managed TCGA archive site. | ||
+ | |||
+ | For current status see: | ||
+ | {{:genomepaper-6-22-11.pdf|LATEST REPORT}} | ||
+ | {{:genomereport-6-22.tar.gz|LATEST REPORT FILES}} | ||
+ | {{:paper.pdf|REPORT-1st-draft}}. | ||
+ | |||
+ | Recent presentation on this project, made for CE-280N {{:ce-280n_presentation.ppt|LATEST PRESENTATION}}. | ||
The plan for this evaluation site is as follows: | The plan for this evaluation site is as follows: | ||
Line 12: | Line 22: | ||
* Pittsburgh Supercomputing Center's site on [[http://www.psc.edu/networking/projects/tcptune/|Enabling High Performance Data Transfers]]. | * Pittsburgh Supercomputing Center's site on [[http://www.psc.edu/networking/projects/tcptune/|Enabling High Performance Data Transfers]]. | ||
* [[http://www.web100.org/|Web100 Project]] | * [[http://www.web100.org/|Web100 Project]] | ||
+ | * Presentation on the [[http://www.es.net/assets/Uploads/20110201-dart-science-dmz.pdf|Science DMZ]] concept. | ||
The 3 tools we are planning the test are: | The 3 tools we are planning the test are: | ||
Line 37: | Line 48: | ||
Related research: | Related research: | ||
+ | - [[http://bioftp.org/index.php/Korean_Reference_Genome_data| KOREF Human Genome]] | ||
- [[http://portal.acm.org/citation.cfm?id=1592576|VL2: A Scalable and Flexible Data Center Network]] : [[VL2Notes|Notes]] | - [[http://portal.acm.org/citation.cfm?id=1592576|VL2: A Scalable and Flexible Data Center Network]] : [[VL2Notes|Notes]] | ||
- [[http://portal.acm.org/citation.cfm?id=956993.957002&coll=DL&dl=ACM&CFID=16657217&CFTOKEN=91943640|Web100: Extended TCP Instrumentation]]: [[Web100|Notes]] | - [[http://portal.acm.org/citation.cfm?id=956993.957002&coll=DL&dl=ACM&CFID=16657217&CFTOKEN=91943640|Web100: Extended TCP Instrumentation]]: [[Web100|Notes]] | ||
Line 44: | Line 56: | ||
* [[http://www4.ncsu.edu/~rhee/export/bitcp/cubic-paper.pdf|TCP Cubic Variant]]: [[Cubic|Notes]] | * [[http://www4.ncsu.edu/~rhee/export/bitcp/cubic-paper.pdf|TCP Cubic Variant]]: [[Cubic|Notes]] | ||
* [[ftp://ftp.cs.arizona.edu/xkernel/Papers/vegas.ps|TCP Vegas]] : [[Vegas|Notes]] | * [[ftp://ftp.cs.arizona.edu/xkernel/Papers/vegas.ps|TCP Vegas]] : [[Vegas|Notes]] | ||
+ | * [[http://gridftp.bio-mirror.net/biomirror/|Bio Mirror (uses GridFTP + UDT)]] | ||
+ | * [[http://www.ogf.org/OGF22/materials/1144/gridftp-ogf22.ppt|Open Grid Forum - Presentation on GridFTP]] | ||
+ | * GridFTP: | ||
+ | * [[http://citeseerx.ist.psu.edu/viewdoc/download?doi=10.1.1.97.8734&rep=rep1&type=pdf| The Globus Striped GridFTP Framework and Server]] | ||
+ | * [[http://citeseerx.ist.psu.edu/viewdoc/download?doi=10.1.1.109.1941&rep=rep1&type=pdf|Globus GridFTP: What’s New in 2007]] | ||
+ | * [[http://citeseerx.ist.psu.edu/viewdoc/download?doi=10.1.1.138.6285&rep=rep1&type=pdf|The Globus eXtensible Input/Output System (XIO)]] | ||
+ | * [[http://citeseerx.ist.psu.edu/viewdoc/download?doi=10.1.1.58.4783&rep=rep1&type=pdf| Internet Congestion Control for Future High Bandwidth-Delay Product Environments]] | ||
+ | * UDT: | ||
+ | * [[http://citeseerx.ist.psu.edu/viewdoc/download?doi=10.1.1.113.5963&rep=rep1&type=pdf| UDT: UDP-based Data Transfer for High-Speed Wide Area Networks ]] | ||
Other links: | Other links: | ||
* [[http://www.dokuwiki.org/syntax|Wiki Syntax]] | * [[http://www.dokuwiki.org/syntax|Wiki Syntax]] |